Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | SAMN05421827_11943 | Not Available | - | 4520932 - 4522809 | 71602.2 |
| fr47-like protein | SAMN05421827_11944 | Not Available | + | 4523301 - 4523984 | 26117.6 |
| iron-binding zinc finger cdgsh type | SAMN05421827_11945 | Not Available | + | 4524069 - 4524293 | 8131.68 |
| hypothetical protein | SAMN05421827_11946 | Not Available | + | 4524409 - 4524603 | 7474.56 |
| dna-binding transcriptional regulator, hxlr family | SAMN05421827_11947 | Not Available | + | 4524715 - 4525113 | 15344.6 |
| hypothetical protein | SAMN05421827_11948 | Not Available | + | 4525210 - 4525743 | 19649.9 |
| arsr family transcriptional regulator | SAMN05421827_11949 | Not Available | + | 4526200 - 4526502 | 11494.8 |
| 2,4-dienoyl-coa reductase | SAMN05421827_11950 | Not Available | + | 4526514 - 4527614 | 40303.5 |
| hypothetical protein | SAMN05421827_11951 | Not Available | + | 4528178 - 4529068 | 33795.7 |
| hypothetical protein | SAMN05421827_11952 | Not Available | + | 4529074 - 4529355 | 10213.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.