Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421827_11933 | Not Available | + | 4511521 - 4512090 | 22455.1 |
| signal transduction histidine kinase | SAMN05421827_11934 | Not Available | + | 4512054 - 4512860 | 30120.1 |
| dna-binding response regulator, narl/fixj family, contains rec and hth domains | SAMN05421827_11935 | Not Available | + | 4512841 - 4513536 | 26233.1 |
| phenylacetate-coa ligase | SAMN05421827_11936 | Not Available | - | 4513687 - 4514850 | 43870.9 |
| glycosyl transferase family 2 | SAMN05421827_11937 | Not Available | - | 4514859 - 4515776 | 35208.1 |
| hypothetical protein | SAMN05421827_11938 | Not Available | - | 4515779 - 4517011 | 46877.3 |
| hypothetical protein | SAMN05421827_11939 | Not Available | - | 4517015 - 4517845 | 31807.2 |
| arac-type dna-binding protein | SAMN05421827_11940 | Not Available | + | 4518341 - 4519225 | 34470.5 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421827_11941 | Not Available | + | 4519290 - 4520024 | 26252.0 |
| two-component system, lytt family, response regulator | SAMN05421827_11942 | Not Available | - | 4520172 - 4520918 | 28411.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.