Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| killing trait domain-containing protein | SAMN05421827_11923 | Not Available | - | 4505845 - 4506111 | 9154.58 |
| killing trait domain-containing protein | SAMN05421827_11924 | Not Available | - | 4506141 - 4506407 | 9080.52 |
| killing trait domain-containing protein | SAMN05421827_11925 | Not Available | - | 4506438 - 4506704 | 9207.67 |
| killing trait domain-containing protein | SAMN05421827_11926 | Not Available | - | 4506747 - 4507013 | 8894.31 |
| killing trait domain-containing protein | SAMN05421827_11927 | Not Available | - | 4507042 - 4507266 | 7553.92 |
| killing trait domain-containing protein | SAMN05421827_11928 | Not Available | - | 4507287 - 4507664 | 12245.3 |
| hypothetical protein | SAMN05421827_11929 | Not Available | - | 4507675 - 4508703 | 36946.0 |
| hypothetical protein | SAMN05421827_11930 | Not Available | - | 4508728 - 4509054 | 11068.1 |
| helix-turn-helix domain-containing protein | SAMN05421827_11931 | Not Available | - | 4509348 - 4510082 | 27919.1 |
| hypothetical protein | SAMN05421827_11932 | Not Available | + | 4510550 - 4511350 | 29904.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.