Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| membrane protein | SAMN05421827_11883 | Not Available | - | 4482544 - 4483488 | 34646.4 |
| protein of unknown function | SAMN05421827_11884 | Not Available | - | 4483626 - 4483976 | 12764.7 |
| hypothetical protein | SAMN05421827_11885 | Not Available | - | 4483997 - 4484152 | 6015.81 |
| murein l,d-transpeptidase ycbb/ykud | SAMN05421827_11886 | Not Available | - | 4484562 - 4486154 | 61294.8 |
| prc-barrel domain-containing protein | SAMN05421827_11887 | Not Available | - | 4486400 - 4487095 | 26665.4 |
| two-component system, ompr family, phosphate regulon response regulator phob | SAMN05421827_11888 | Not Available | - | 4487762 - 4488121 | 13783.8 |
| pas domain s-box-containing protein | SAMN05421827_11889 | Not Available | - | 4488189 - 4490936 | 102751.0 |
| Trna-met | Not Available | Not Available | + | 4491646 - 4491722 | Not Available |
| acetyltransferase (gnat) family protein | SAMN05421827_1191 | Not Available | - | 4492500 - 4492886 | 14847.8 |
| gtp-binding protein | SAMN05421827_1192 | Not Available | - | 4493263 - 4494564 | 49126.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.