Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| beta-fructofuranosidase/levanase/fructan beta-fructosidase | SAMN05421827_11853 | Not Available | + | 4450182 - 4452140 | 74331.0 |
| fructan beta-fructosidase | SAMN05421827_11854 | Not Available | + | 4452177 - 4453697 | 57299.4 |
| aldo/keto reductase family protein | SAMN05421827_11855 | Not Available | + | 4453941 - 4454264 | 11671.8 |
| hypothetical protein | SAMN05421827_11856 | Not Available | - | 4454288 - 4454419 | 5001.96 |
| hypothetical protein | SAMN05421827_11857 | Not Available | - | 4454600 - 4454740 | 5375.68 |
| histidine kinase | SAMN05421827_11858 | Not Available | - | 4455646 - 4456785 | 44267.2 |
| hypothetical protein | SAMN05421827_11859 | Not Available | + | 4456798 - 4456935 | 5166.23 |
| two-component system, lytt family, response regulator | SAMN05421827_11860 | Not Available | - | 4456932 - 4457657 | 27229.0 |
| outer membrane receptor proteins, mostly fe transport | SAMN05421827_11861 | Not Available | + | 4457822 - 4460329 | 94887.2 |
| hypothetical protein | SAMN05421827_11862 | Not Available | + | 4460378 - 4460551 | 6153.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.