Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, hxlr family | SAMN05421827_11843 | Not Available | - | 4434764 - 4435186 | 15808.4 |
| nadph:quinone reductase | SAMN05421827_11844 | Not Available | + | 4435298 - 4436245 | 33962.5 |
| hypothetical protein | SAMN05421827_11845 | Not Available | - | 4436339 - 4436650 | 11461.2 |
| abc-type sugar transport system, substrate-binding protein, contains n-terminal xre family hth domain | SAMN05421827_11846 | Not Available | - | 4436915 - 4439689 | 104537.0 |
| mfs transporter, sugar porter (sp) family | SAMN05421827_11847 | Not Available | + | 4440024 - 4441358 | 48573.2 |
| fructokinase | SAMN05421827_11848 | Not Available | + | 4441366 - 4442325 | 35562.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421827_11849 | Not Available | + | 4442403 - 4445474 | 112517.0 |
| starch-binding associating with outer membrane | SAMN05421827_11850 | Not Available | + | 4445490 - 4447187 | 63345.9 |
| protein of unknown function | SAMN05421827_11851 | Not Available | + | 4447206 - 4448585 | 49903.8 |
| beta-fructofuranosidase | SAMN05421827_11852 | Not Available | + | 4448611 - 4450170 | 56873.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.