Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, hxlr family | SAMN05421827_11823 | Not Available | - | 4413892 - 4414284 | 14934.5 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN05421827_11824 | Not Available | + | 4414376 - 4415116 | 25503.8 |
| peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domains | SAMN05421827_11825 | Not Available | - | 4415276 - 4416391 | 42113.5 |
| cobalt-zinc-cadmium resistance protein czca | SAMN05421827_11826 | Not Available | + | 4417152 - 4421528 | 161069.0 |
| membrane fusion protein, cobalt-zinc-cadmium efflux system | SAMN05421827_11827 | Not Available | + | 4421540 - 4422712 | 44169.2 |
| predicted dehydrogenase | SAMN05421827_11828 | Not Available | + | 4423523 - 4424641 | 41099.8 |
| lyttr dna-binding domain-containing protein | SAMN05421827_11829 | Not Available | - | 4424689 - 4425786 | 41392.1 |
| haem-binding domain-containing protein | SAMN05421827_11830 | Not Available | + | 4425967 - 4426899 | 34779.8 |
| hypothetical protein | SAMN05421827_11831 | Not Available | + | 4426901 - 4427377 | 17371.2 |
| hpt (histidine-containing phosphotransfer) domain-containing protein | SAMN05421827_11832 | Not Available | - | 4427921 - 4428292 | 14209.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.