Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| enterochelin esterase | SAMN05421827_117104 | Not Available | - | 4381005 - 4381817 | 30437.5 |
| esterase/lipase superfamily enzyme | SAMN05421827_117105 | Not Available | + | 4381999 - 4382706 | 27334.4 |
| glutathione synthase/rimk-type ligase, atp-grasp superfamily | SAMN05421827_117106 | Not Available | + | 4382885 - 4383964 | 40383.1 |
| carboxylate-amine ligase | SAMN05421827_117107 | Not Available | + | 4383994 - 4385094 | 42220.4 |
| gmp synthase-glutamine amidotransferase | SAMN05421827_117108 | Not Available | + | 4385103 - 4385945 | 32187.4 |
| hypothetical protein | SAMN05421827_117109 | Not Available | + | 4386142 - 4387329 | 45664.7 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05421827_117110 | Not Available | + | 4387737 - 4388324 | 22864.8 |
| polyisoprenoid-binding protein ycei | SAMN05421827_117111 | Not Available | + | 4388522 - 4389052 | 19311.6 |
| hypothetical protein | SAMN05421827_117112 | Not Available | + | 4389127 - 4389996 | 32040.0 |
| transposase | SAMN05421827_117113 | Not Available | + | 4390404 - 4391426 | 38228.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.