Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421827_11794 | Not Available | + | 4371116 - 4371862 | 28701.1 |
| protease i | SAMN05421827_11795 | Not Available | + | 4372088 - 4372648 | 20186.7 |
| hypothetical protein | SAMN05421827_11796 | Not Available | - | 4372800 - 4373843 | 41014.4 |
| cubico group peptidase, beta-lactamase class c family | SAMN05421827_11797 | Not Available | - | 4373989 - 4375179 | 45187.4 |
| kdo2-lipid iv(a) lauroyltransferase | SAMN05421827_11798 | Not Available | - | 4375257 - 4376132 | 34538.3 |
| kdo2-lipid iv(a) lauroyltransferase | SAMN05421827_11799 | Not Available | - | 4376223 - 4377161 | 36572.3 |
| gtp-binding protein | SAMN05421827_117100 | Not Available | - | 4377416 - 4379221 | 67196.4 |
| hypothetical protein | SAMN05421827_117101 | Not Available | + | 4379501 - 4379848 | 13285.6 |
| hypothetical protein | SAMN05421827_117102 | Not Available | - | 4379932 - 4380123 | 7315.0 |
| conserved hypothetical protein | SAMN05421827_117103 | Not Available | + | 4380226 - 4380903 | 25722.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.