Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein-tyrosine phosphatase | SAMN05421827_11784 | Not Available | + | 4359241 - 4359663 | 15879.9 |
| type 1 glutamine amidotransferase (gatase1) | SAMN05421827_11785 | Not Available | + | 4359633 - 4360475 | 32145.2 |
| hemolysin iii | SAMN05421827_11786 | Not Available | - | 4360543 - 4361217 | 25989.1 |
| alpha-l-fucosidase | SAMN05421827_11787 | Not Available | + | 4361383 - 4362834 | 54035.2 |
| rhomboid protease glup | SAMN05421827_11788 | Not Available | - | 4362841 - 4364367 | 58331.4 |
| methyltransferase domain-containing protein | SAMN05421827_11789 | Not Available | - | 4364374 - 4365123 | 28726.9 |
| hypothetical protein | SAMN05421827_11790 | Not Available | + | 4365183 - 4365389 | 7708.51 |
| n-terminal domain of tricorn protease-containing protein | SAMN05421827_11791 | Not Available | - | 4365304 - 4368498 | 120874.0 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421827_11792 | Not Available | + | 4368625 - 4369905 | 48301.1 |
| predicted nuclease of restriction endonuclease-like (recb) superfamily, duf1016 family | SAMN05421827_11793 | Not Available | + | 4369968 - 4371113 | 44236.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.