Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| preprotein translocase subunit seca | SAMN05421827_11774 | Not Available | - | 4349210 - 4352686 | 130721.0 |
| hypothetical protein | SAMN05421827_11775 | Not Available | - | 4352822 - 4353121 | 11056.5 |
| hypothetical protein | SAMN05421827_11776 | Not Available | - | 4353222 - 4353311 | 3395.97 |
| smr domain-containing protein | SAMN05421827_11777 | Not Available | - | 4353311 - 4354291 | 36705.1 |
| ribosome biogenesis gtpase | SAMN05421827_11778 | Not Available | - | 4354366 - 4355286 | 34258.1 |
| fumarate hydratase, class ii | SAMN05421827_11779 | Not Available | + | 4355308 - 4356882 | 56756.7 |
| hypothetical protein | SAMN05421827_11780 | Not Available | - | 4356919 - 4357140 | 8389.58 |
| hypothetical protein | SAMN05421827_11781 | Not Available | + | 4357359 - 4357874 | 19676.7 |
| s1/p1 nuclease | SAMN05421827_11782 | Not Available | + | 4357877 - 4358683 | 30873.1 |
| hypothetical protein | SAMN05421827_11783 | Not Available | + | 4358804 - 4359226 | 15330.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.