Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05421827_11764 | Not Available | + | 4339803 - 4340333 | 19561.4 |
| glutamine cyclotransferase | SAMN05421827_11765 | Not Available | - | 4340550 - 4341632 | 40126.0 |
| putative endonuclease | SAMN05421827_11766 | Not Available | - | 4341610 - 4341975 | 14072.6 |
| dna primase | SAMN05421827_11767 | Not Available | - | 4342213 - 4344192 | 74584.2 |
| lysophospholipase l1 | SAMN05421827_11768 | Not Available | - | 4344352 - 4345014 | 24516.8 |
| hypothetical protein | SAMN05421827_11769 | Not Available | - | 4345236 - 4346177 | 37204.0 |
| amidohydrolase | SAMN05421827_11770 | Not Available | - | 4346296 - 4347480 | 43506.1 |
| sporulation related domain-containing protein | SAMN05421827_11771 | Not Available | - | 4347467 - 4347928 | 17699.6 |
| hypothetical protein | SAMN05421827_11772 | Not Available | - | 4348281 - 4348544 | 10137.4 |
| pega domain-containing protein | SAMN05421827_11773 | Not Available | - | 4348606 - 4348983 | 13397.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.