Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein beta-barrel domain-containing protein | SAMN05421827_11754 | Not Available | - | 4330895 - 4331563 | 23949.6 |
| gliding motility-associated lipoprotein gldb | SAMN05421827_11755 | Not Available | + | 4331594 - 4332628 | 40520.4 |
| nte family protein | SAMN05421827_11756 | Not Available | + | 4332688 - 4333458 | 27707.2 |
| 2-phosphosulfolactate phosphatase | SAMN05421827_11757 | Not Available | - | 4333570 - 4334286 | 26398.6 |
| predicted nuclease of restriction endonuclease-like (recb) superfamily, duf1016 family | SAMN05421827_11758 | Not Available | - | 4334296 - 4335360 | 41083.8 |
| aminomethyltransferase | SAMN05421827_11759 | Not Available | - | 4335397 - 4336476 | 39292.8 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421827_11760 | Not Available | - | 4336735 - 4337925 | 46022.4 |
| rnase hii | SAMN05421827_11761 | Not Available | - | 4337960 - 4338568 | 22667.3 |
| tfox n-terminal domain-containing protein | SAMN05421827_11762 | Not Available | + | 4338655 - 4338996 | 13036.1 |
| hypothetical protein | SAMN05421827_11763 | Not Available | + | 4339075 - 4339695 | 21950.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.