Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| seryl-trna synthetase | SAMN05421827_11744 | Not Available | - | 4321790 - 4323061 | 47647.8 |
| 16s rrna (cytidine1402-2'-o)-methyltransferase | SAMN05421827_11745 | Not Available | + | 4323159 - 4323872 | 26539.0 |
| short c-terminal domain-containing protein | SAMN05421827_11746 | Not Available | + | 4323911 - 4324564 | 24901.9 |
| apolipoprotein n-acyltransferase | SAMN05421827_11747 | Not Available | + | 4324986 - 4326614 | 61280.3 |
| uncharacterized damage-inducible protein dinb (forms a four-helix bundle) | SAMN05421827_11748 | Not Available | + | 4326607 - 4327068 | 17814.2 |
| signal peptidase ii | SAMN05421827_11749 | Not Available | + | 4327073 - 4327579 | 19262.0 |
| dual-action heigh metallo-peptidase | SAMN05421827_11750 | Not Available | + | 4327709 - 4328458 | 26916.9 |
| hypothetical protein | SAMN05421827_11751 | Not Available | + | 4328494 - 4328589 | 3832.81 |
| osmotically inducible protein osmc | SAMN05421827_11752 | Not Available | + | 4328663 - 4329079 | 14755.2 |
| nad+ synthase (glutamine-hydrolysing) | SAMN05421827_11753 | Not Available | - | 4329205 - 4330845 | 61112.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.