Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative auto-transporter adhesin, head gin domain | SAMN05421827_11732 | Not Available | + | 4312251 - 4312982 | 24624.1 |
| hypothetical protein | SAMN05421827_11735 | Not Available | + | 4313506 - 4314342 | 31912.0 |
| protein of unknown function | SAMN05421827_11736 | Not Available | + | 4314353 - 4314799 | 17158.7 |
| hypothetical protein | SAMN05421827_11737 | Not Available | - | 4315046 - 4315888 | 31856.4 |
| protein of unknown function | SAMN05421827_11738 | Not Available | - | 4316022 - 4316729 | 27510.9 |
| enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-coa reductase (nad+) | SAMN05421827_11739 | Not Available | + | 4317474 - 4318667 | 43233.5 |
| protein n-acetyltransferase, rimj/riml family | SAMN05421827_11740 | Not Available | + | 4318784 - 4319320 | 20607.5 |
| cold shock protein, cspa family | SAMN05421827_11741 | Not Available | + | 4319548 - 4320000 | 16867.1 |
| hypothetical protein | SAMN05421827_11742 | Not Available | + | 4320511 - 4321197 | 25327.8 |
| hypothetical protein | SAMN05421827_11743 | Not Available | + | 4321292 - 4321606 | 11569.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.