Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421827_11722 | Not Available | - | 4302458 - 4302643 | 6878.39 |
| predicted membrane protein | SAMN05421827_11723 | Not Available | - | 4302679 - 4303287 | 22885.1 |
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed | SAMN05421827_11724 | Not Available | - | 4303334 - 4303999 | 25277.5 |
| uncharacterized conserved protein | SAMN05421827_11725 | Not Available | - | 4304023 - 4305204 | 44335.7 |
| hypothetical protein | SAMN05421827_11726 | Not Available | - | 4305400 - 4306212 | 30218.3 |
| hypothetical protein | SAMN05421827_11727 | Not Available | + | 4306301 - 4306576 | 10419.9 |
| hypothetical protein | SAMN05421827_11728 | Not Available | + | 4306566 - 4308437 | 71240.4 |
| hypothetical protein | SAMN05421827_11729 | Not Available | - | 4308389 - 4308478 | 3413.92 |
| hypothetical protein | SAMN05421827_11730 | Not Available | + | 4308502 - 4310367 | 70863.9 |
| peptidase family m1 | SAMN05421827_11731 | Not Available | + | 4310487 - 4312142 | 62726.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.