Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein tolc | SAMN05421827_11712 | Not Available | + | 4289377 - 4290690 | 48537.0 |
| rnd family efflux transporter, mfp subunit | SAMN05421827_11713 | Not Available | + | 4290693 - 4291760 | 38461.2 |
| hydrophobic/amphiphilic exporter-1, hae1 family | SAMN05421827_11714 | Not Available | + | 4291826 - 4295020 | 116014.0 |
| hypothetical protein | SAMN05421827_11715 | Not Available | + | 4295235 - 4296038 | 30156.9 |
| fucose permease | SAMN05421827_11716 | Not Available | - | 4296568 - 4297773 | 43638.6 |
| thiaminase (transcriptional activator tena) | SAMN05421827_11717 | Not Available | - | 4297882 - 4298535 | 24858.6 |
| hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | SAMN05421827_11718 | Not Available | - | 4298532 - 4299350 | 28562.0 |
| dihydrolipoamide dehydrogenase | SAMN05421827_11719 | Not Available | - | 4299905 - 4301311 | 49866.2 |
| hypothetical protein | SAMN05421827_11720 | Not Available | - | 4301673 - 4302029 | 13829.5 |
| hypothetical protein | SAMN05421827_11721 | Not Available | - | 4302083 - 4302415 | 12490.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.