Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421827_116115 | Not Available | - | 4273497 - 4273688 | 7057.38 |
| hypothetical protein | SAMN05421827_116116 | Not Available | - | 4273692 - 4273841 | 5596.01 |
| hypothetical protein | SAMN05421827_116117 | Not Available | - | 4273871 - 4274098 | 8463.2 |
| phenylalanine-4-hydroxylase | SAMN05421827_116118 | Not Available | - | 4274130 - 4275911 | 66725.4 |
| putative flippase gtra (transmembrane translocase of bactoprenol-linked glucose) | SAMN05421827_116119 | Not Available | - | 4276241 - 4276750 | 19759.6 |
| hypothetical protein | SAMN05421827_116120 | Not Available | - | 4276956 - 4277645 | 26412.4 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421827_116121 | Not Available | - | 4277840 - 4278604 | 26705.9 |
| arac-type dna-binding protein | SAMN05421827_116122 | Not Available | - | 4278691 - 4279098 | 15675.7 |
| 2'-5' rna ligase | SAMN05421827_116123 | Not Available | - | 4279177 - 4279863 | 26600.7 |
| Trna-asn | Not Available | Not Available | + | 4280180 - 4280253 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.