Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421827_116105 | Not Available | + | 4267424 - 4267528 | 4323.32 |
| hypothetical protein | SAMN05421827_116106 | Not Available | - | 4267513 - 4267614 | 3803.94 |
| fumarylacetoacetate (faa) hydrolase | SAMN05421827_116107 | Not Available | + | 4267775 - 4268770 | 36950.5 |
| nadh-fmn oxidoreductase rutf, flavin reductase (dim6/ntab) family | SAMN05421827_116108 | Not Available | + | 4268956 - 4269843 | 32702.3 |
| hypothetical protein | SAMN05421827_116109 | Not Available | + | 4269896 - 4270519 | 23451.8 |
| hypothetical protein | SAMN05421827_116110 | Not Available | + | 4270708 - 4271007 | 12218.0 |
| uncharacterized conserved protein ydei, yjbr/cyay-like superfamily, duf1801 family | SAMN05421827_116111 | Not Available | + | 4271018 - 4271623 | 23502.5 |
| nlpc/p60 family protein | SAMN05421827_116112 | Not Available | - | 4271624 - 4272169 | 19845.1 |
| uncharacterized membrane protein | SAMN05421827_116113 | Not Available | - | 4272285 - 4272647 | 13216.5 |
| short-chain dehydrogenase | SAMN05421827_116114 | Not Available | - | 4272694 - 4273395 | 25081.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.