Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin | SAMN05421827_11694 | Not Available | + | 4257865 - 4258185 | 11662.2 |
| glucose/arabinose dehydrogenase, beta-propeller fold | SAMN05421827_11695 | Not Available | + | 4258313 - 4259530 | 43873.5 |
| hypothetical protein | SAMN05421827_11696 | Not Available | - | 4259603 - 4259734 | 5088.39 |
| protein of unknown function duf58 | SAMN05421827_11698 | Not Available | + | 4260100 - 4261017 | 35351.1 |
| peroxiredoxin | SAMN05421827_11699 | Not Available | + | 4261083 - 4261544 | 17204.5 |
| thioredoxin | SAMN05421827_116100 | Not Available | + | 4261549 - 4262067 | 19234.2 |
| hypothetical protein | SAMN05421827_116101 | Not Available | - | 4262134 - 4262586 | 17083.9 |
| pyruvate dehydrogenase (quinone) | SAMN05421827_116102 | Not Available | + | 4262983 - 4264719 | 63121.6 |
| 4-hydroxyphenylpyruvate dioxygenase | SAMN05421827_116103 | Not Available | - | 4264854 - 4265984 | 42648.5 |
| homogentisate 1,2-dioxygenase | SAMN05421827_116104 | Not Available | - | 4266257 - 4267417 | 44441.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.