Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN05421827_11684 | Not Available | - | 4245285 - 4245962 | 25291.0 |
| polyketide cyclase / dehydrase and lipid transport | SAMN05421827_11685 | Not Available | - | 4246372 - 4246905 | 20168.7 |
| hemoglobin | SAMN05421827_11686 | Not Available | - | 4246969 - 4247364 | 15210.4 |
| hypothetical protein | SAMN05421827_11687 | Not Available | - | 4247345 - 4247788 | 16273.0 |
| aspartyl protease | SAMN05421827_11688 | Not Available | - | 4247852 - 4248280 | 16050.7 |
| peptidase family s41 | SAMN05421827_11689 | Not Available | - | 4248337 - 4250142 | 68960.8 |
| arac-like ligand binding domain-containing protein | SAMN05421827_11690 | Not Available | - | 4250213 - 4251019 | 31258.5 |
| malate dehydrogenase | SAMN05421827_11691 | Not Available | - | 4251185 - 4252123 | 33146.3 |
| apolipoprotein d and lipocalin family protein | SAMN05421827_11692 | Not Available | + | 4252269 - 4252721 | 17934.2 |
| dna polymerase-3 subunit alpha | SAMN05421827_11693 | Not Available | + | 4253264 - 4257697 | 166825.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.