Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribosome-associated heat shock protein hsp15 | SAMN05421827_11674 | Not Available | + | 4234394 - 4234792 | 15061.2 |
| ecsc protein family protein | SAMN05421827_11675 | Not Available | - | 4234793 - 4235566 | 29369.8 |
| peroxiredoxin | SAMN05421827_11676 | Not Available | + | 4235674 - 4237590 | 70824.6 |
| trna(arg) a34 adenosine deaminase tada | SAMN05421827_11677 | Not Available | - | 4237642 - 4238094 | 16572.9 |
| outer membrane protein | SAMN05421827_11678 | Not Available | - | 4238222 - 4238821 | 22286.2 |
| dna gyrase subunit b | SAMN05421827_11679 | Not Available | + | 4239694 - 4241652 | 72349.0 |
| hypothetical protein | SAMN05421827_11680 | Not Available | - | 4241788 - 4241925 | 5213.53 |
| putative membrane protein | SAMN05421827_11681 | Not Available | - | 4242233 - 4243159 | 35652.8 |
| hypothetical protein | SAMN05421827_11682 | Not Available | - | 4243177 - 4243674 | 18963.8 |
| signal transduction histidine kinase | SAMN05421827_11683 | Not Available | - | 4243932 - 4245284 | 51317.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.