Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| long-chain fatty acid transport protein | SAMN05421827_11664 | Not Available | + | 4223957 - 4225180 | 44126.3 |
| gdsl-like lipase/acylhydrolase | SAMN05421827_11665 | Not Available | + | 4225174 - 4226487 | 46315.2 |
| trna dimethylallyltransferase | SAMN05421827_11666 | Not Available | - | 4226537 - 4227451 | 34454.3 |
| pria4b orf-3-like protein | SAMN05421827_11667 | Not Available | - | 4227525 - 4228253 | 28262.5 |
| hdig domain-containing protein | SAMN05421827_11668 | Not Available | - | 4228272 - 4229678 | 53501.5 |
| l-threonylcarbamoyladenylate synthase | SAMN05421827_11669 | Not Available | - | 4229785 - 4230351 | 20922.2 |
| protein of unknown function | SAMN05421827_11670 | Not Available | + | 4230544 - 4231095 | 20991.0 |
| protein of unknown function | SAMN05421827_11671 | Not Available | + | 4231208 - 4231831 | 23516.3 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421827_11672 | Not Available | - | 4232152 - 4233351 | 45124.7 |
| 2,3,4,5-tetrahydropyridine-2-carboxylate n-succinyltransferase | SAMN05421827_11673 | Not Available | - | 4233367 - 4234185 | 29604.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.