Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| preprotein translocase subunit sece | SAMN05421827_11654 | Not Available | + | 4211509 - 4211706 | 7305.95 |
| transcription antitermination protein nusg | SAMN05421827_11655 | Not Available | + | 4211716 - 4212255 | 20379.0 |
| large subunit ribosomal protein l11 | SAMN05421827_11656 | Not Available | + | 4212561 - 4213004 | 15623.0 |
| large subunit ribosomal protein l1 | SAMN05421827_11657 | Not Available | + | 4213025 - 4213723 | 24497.9 |
| large subunit ribosomal protein l10 | SAMN05421827_11658 | Not Available | + | 4213726 - 4214247 | 18818.6 |
| large subunit ribosomal protein l7/l12 | SAMN05421827_11659 | Not Available | + | 4214314 - 4214691 | 12820.5 |
| dna-directed rna polymerase subunit beta | SAMN05421827_11660 | Not Available | + | 4214849 - 4218652 | 142203.0 |
| dna-directed rna polymerase subunit beta' | SAMN05421827_11661 | Not Available | + | 4218746 - 4223032 | 159464.0 |
| hypothetical protein | SAMN05421827_11662 | Not Available | + | 4223350 - 4223490 | 5459.4 |
| protein of unknown function | SAMN05421827_11663 | Not Available | + | 4223570 - 4223881 | 11517.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.