Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | SAMN05421827_11634 | Not Available | + | 4192460 - 4195267 | 105624.0 |
| hypothetical protein | SAMN05421827_11635 | Not Available | + | 4195336 - 4196694 | 46751.7 |
| dual-action heigh metallo-peptidase | SAMN05421827_11636 | Not Available | + | 4196897 - 4198072 | 44118.1 |
| hypothetical protein | SAMN05421827_11637 | Not Available | - | 4198367 - 4198675 | 11556.3 |
| hypothetical protein | SAMN05421827_11638 | Not Available | - | 4198945 - 4199220 | 10145.9 |
| hypothetical protein | SAMN05421827_11639 | Not Available | - | 4199338 - 4200492 | 45124.7 |
| putative hemolysin | SAMN05421827_11640 | Not Available | - | 4200874 - 4202625 | 66583.5 |
| competence protein comea helix-hairpin-helix repeat region | SAMN05421827_11641 | Not Available | + | 4202720 - 4203619 | 34332.8 |
| acyl-coa dehydrogenase | SAMN05421827_11642 | Not Available | + | 4204755 - 4205909 | 41744.1 |
| hypothetical protein | SAMN05421827_11643 | Not Available | + | 4206165 - 4206338 | 6047.53 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.