Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family | SAMN05421827_11624 | Not Available | + | 4183244 - 4184080 | 31568.9 |
| prolipoprotein diacylglyceryltransferase | SAMN05421827_11625 | Not Available | + | 4184084 - 4184848 | 29385.8 |
| hypothetical protein | SAMN05421827_11626 | Not Available | + | 4184854 - 4186248 | 53443.3 |
| hypothetical protein | SAMN05421827_11627 | Not Available | + | 4186250 - 4186438 | 6615.75 |
| hypothetical protein | SAMN05421827_11628 | Not Available | + | 4186455 - 4186649 | 6860.06 |
| phenylalanyl-trna synthetase beta chain | SAMN05421827_11629 | Not Available | + | 4186864 - 4189263 | 88499.1 |
| hypothetical protein | SAMN05421827_11630 | Not Available | + | 4189295 - 4189585 | 10679.0 |
| cell division protein zapa | SAMN05421827_11631 | Not Available | + | 4189618 - 4189908 | 11135.4 |
| ribonucrease y | SAMN05421827_11632 | Not Available | + | 4190172 - 4191743 | 58790.2 |
| uncharacterized membrane protein ygl010w | SAMN05421827_11633 | Not Available | + | 4191832 - 4192347 | 19631.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.