Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thymidine kinase | SAMN05421827_1164 | Not Available | - | 4163603 - 4164184 | 21257.6 |
| hypothetical protein | SAMN05421827_1165 | Not Available | + | 4164307 - 4165536 | 46442.3 |
| hypothetical protein | SAMN05421827_1166 | Not Available | - | 4165877 - 4166056 | 6904.46 |
| rod shape determining protein roda | SAMN05421827_1167 | Not Available | - | 4166366 - 4167631 | 46878.7 |
| penicillin-binding protein 2 | SAMN05421827_1168 | Not Available | - | 4167631 - 4169640 | 74937.6 |
| hypothetical protein | SAMN05421827_1169 | Not Available | - | 4169641 - 4170156 | 19861.0 |
| rod shape-determining protein mrec | SAMN05421827_11610 | Not Available | - | 4170149 - 4170988 | 30868.4 |
| rod shape-determining protein mreb | SAMN05421827_11611 | Not Available | - | 4171074 - 4172096 | 36735.0 |
| phosphoribosylaminoimidazolecarboxamide formyltransferase / imp cyclohydrolase | SAMN05421827_11612 | Not Available | - | 4172342 - 4173868 | 55415.1 |
| hlyd family secretion protein | SAMN05421827_11613 | Not Available | - | 4174067 - 4175371 | 50010.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.