Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptidyl-prolyl cis-trans isomerase sura | SAMN05421827_115107 | Not Available | + | 4154372 - 4155733 | 51570.0 |
| moxr-like atpase | SAMN05421827_115108 | Not Available | + | 4155739 - 4156701 | 35544.9 |
| dinb family protein | SAMN05421827_115109 | Not Available | + | 4156996 - 4157481 | 18650.4 |
| phosphatidylethanolamine/phosphatidyl-n- methylethanolamine n-methyltransferase | SAMN05421827_115110 | Not Available | + | 4157492 - 4158079 | 22947.0 |
| hypothetical protein | SAMN05421827_115111 | Not Available | + | 4158836 - 4159357 | 20328.3 |
| hypothetical protein | SAMN05421827_115112 | Not Available | + | 4159473 - 4159661 | 6989.26 |
| glycerophosphoryl diester phosphodiesterase | SAMN05421827_115113 | Not Available | - | 4159729 - 4160616 | 33796.5 |
| nucleoside-diphosphate-sugar epimerase | SAMN05421827_1161 | Not Available | - | 4161031 - 4161849 | 29825.8 |
| nucleoside-diphosphate-sugar epimerase | SAMN05421827_1162 | Not Available | - | 4161895 - 4162827 | 34701.2 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05421827_1163 | Not Available | - | 4162958 - 4163557 | 23394.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.