Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phytanoyl-coa dioxygenase (phyh) | SAMN05421827_11597 | Not Available | + | 4144366 - 4145115 | 28848.5 |
| dnaj domain-containing protein | SAMN05421827_11598 | Not Available | - | 4145259 - 4145705 | 17493.7 |
| n-acetyl-alpha-d-glucosaminyl l-malate synthase bsha | SAMN05421827_11599 | Not Available | - | 4145968 - 4147110 | 42365.8 |
| hypothetical protein | SAMN05421827_115100 | Not Available | - | 4147435 - 4147923 | 18974.2 |
| trna(ile)-lysidine synthase | SAMN05421827_115101 | Not Available | - | 4147924 - 4149255 | 50691.4 |
| lipopolysaccharide export system protein lpta | SAMN05421827_115102 | Not Available | + | 4149321 - 4151723 | 89506.1 |
| hypothetical protein | SAMN05421827_115103 | Not Available | + | 4151760 - 4151981 | 8479.81 |
| xtp/ditp diphosphohydrolase | SAMN05421827_115104 | Not Available | - | 4152283 - 4152858 | 21203.2 |
| hypothetical protein | SAMN05421827_115105 | Not Available | - | 4152972 - 4153625 | 24661.5 |
| hypothetical protein | SAMN05421827_115106 | Not Available | + | 4153691 - 4154317 | 24313.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.