Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glyoxylase, beta-lactamase superfamily ii | SAMN05421827_11587 | Not Available | - | 4129965 - 4131377 | 51272.5 |
| l-asparaginase | SAMN05421827_11588 | Not Available | - | 4131781 - 4132800 | 37819.6 |
| tatd dnase family protein | SAMN05421827_11589 | Not Available | - | 4133044 - 4133811 | 28584.4 |
| excinuclease abc subunit a | SAMN05421827_11590 | Not Available | - | 4134055 - 4136970 | 108559.0 |
| hypothetical protein | SAMN05421827_11591 | Not Available | - | 4137083 - 4138042 | 37057.5 |
| ring-1,2-phenylacetyl-coa epoxidase subunit paae | SAMN05421827_11592 | Not Available | - | 4138313 - 4139413 | 42352.9 |
| transglycosylase slt domain-containing protein | SAMN05421827_11593 | Not Available | - | 4139849 - 4140631 | 29615.3 |
| 23s rrna pseudouridine2605 synthase | SAMN05421827_11594 | Not Available | + | 4140894 - 4142462 | 59653.7 |
| 6-phosphogluconolactonase | SAMN05421827_11595 | Not Available | + | 4142746 - 4143855 | 40175.7 |
| activator of hsp90 atpase homolog 1-like protein | SAMN05421827_11596 | Not Available | + | 4143870 - 4144364 | 19495.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.