Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| metal-dependent hydrolase, beta-lactamase superfamily ii | SAMN05421827_11576 | Not Available | - | 4116748 - 4117836 | 41214.9 |
| hypothetical protein | SAMN05421827_11577 | Not Available | - | 4117989 - 4118105 | 4510.21 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN05421827_11578 | Not Available | - | 4118572 - 4120617 | 78518.5 |
| site-specific recombinase xerd | SAMN05421827_11579 | Not Available | - | 4121167 - 4122432 | 49528.4 |
| cbs domain-containing protein | SAMN05421827_11581 | Not Available | + | 4123032 - 4123460 | 15889.6 |
| pa domain-containing protein | SAMN05421827_11582 | Not Available | - | 4123720 - 4125168 | 52409.9 |
| tellurite resistance protein terc | SAMN05421827_11583 | Not Available | - | 4125355 - 4126410 | 40118.5 |
| octaprenyl-diphosphate synthase | SAMN05421827_11584 | Not Available | - | 4126410 - 4127441 | 38723.0 |
| esterase/lipase | SAMN05421827_11585 | Not Available | + | 4127672 - 4128664 | 37101.9 |
| thioredoxin reductase (nadph) | SAMN05421827_11586 | Not Available | - | 4128870 - 4129838 | 35981.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.