Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 4-amino-4-deoxy-l-arabinose transferase | SAMN05421827_11565 | Not Available | + | 4103628 - 4105268 | 62748.9 |
| putative flippase gtra (transmembrane translocase of bactoprenol-linked glucose) | SAMN05421827_11566 | Not Available | + | 4105269 - 4105649 | 14647.2 |
| hypothetical protein | SAMN05421827_11567 | Not Available | + | 4105963 - 4106943 | 36881.7 |
| hypothetical protein | SAMN05421827_11568 | Not Available | - | 4107071 - 4107412 | 12143.0 |
| adenosylhomocysteinase | SAMN05421827_11570 | Not Available | - | 4107707 - 4109023 | 48269.7 |
| dna binding domain-containing protein, excisionase family | SAMN05421827_11571 | Not Available | - | 4109243 - 4109554 | 11732.9 |
| restriction endonuclease | SAMN05421827_11572 | Not Available | - | 4110277 - 4111614 | 50719.9 |
| exonuclease sbcc | SAMN05421827_11573 | Not Available | - | 4111721 - 4114885 | 120950.0 |
| hypothetical protein | SAMN05421827_11574 | Not Available | - | 4114866 - 4115432 | 22152.5 |
| hypothetical protein | SAMN05421827_11575 | Not Available | - | 4115401 - 4116744 | 51229.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.