Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| single-stranded-dna-specific exonuclease | SAMN05421827_11555 | Not Available | - | 4091009 - 4092790 | 66621.3 |
| glyoxylase, beta-lactamase superfamily ii | SAMN05421827_11556 | Not Available | + | 4092933 - 4093700 | 28889.9 |
| polyisoprenoid-binding protein ycei | SAMN05421827_11557 | Not Available | - | 4094186 - 4094770 | 20263.5 |
| glycine dehydrogenase | SAMN05421827_11558 | Not Available | - | 4095425 - 4098301 | 104620.0 |
| padr family transcriptional regulator, regulatory protein padr | SAMN05421827_11559 | Not Available | + | 4098780 - 4099118 | 13142.0 |
| protein of unknown function | SAMN05421827_11560 | Not Available | + | 4099115 - 4099705 | 22646.0 |
| cubico group peptidase, beta-lactamase class c family | SAMN05421827_11561 | Not Available | + | 4099710 - 4101032 | 49019.6 |
| hypothetical protein | SAMN05421827_11562 | Not Available | - | 4101079 - 4101642 | 21119.5 |
| threonine/homoserine efflux transporter rhta | SAMN05421827_11563 | Not Available | - | 4101841 - 4102731 | 31993.7 |
| pyridoxine 5-phosphate synthase | SAMN05421827_11564 | Not Available | - | 4102828 - 4103544 | 26407.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.