Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fic/doc family protein | SAMN05421827_11535 | Not Available | - | 4075465 - 4076457 | 38324.8 |
| phytoene desaturase | SAMN05421827_11536 | Not Available | + | 4076497 - 4077984 | 56059.9 |
| shikimate kinase | SAMN05421827_11537 | Not Available | - | 4078151 - 4078654 | 19009.9 |
| uncharacterized damage-inducible protein dinb (forms a four-helix bundle) | SAMN05421827_11538 | Not Available | - | 4078674 - 4079120 | 17777.4 |
| peptide/nickel transport system permease protein | SAMN05421827_11539 | Not Available | - | 4079126 - 4080229 | 40802.6 |
| doxx protein | SAMN05421827_11540 | Not Available | - | 4080183 - 4081334 | 43273.5 |
| protein of unknown function | SAMN05421827_11541 | Not Available | - | 4081355 - 4081906 | 21039.4 |
| dihydropteroate synthase | SAMN05421827_11542 | Not Available | + | 4082000 - 4082851 | 31316.2 |
| tigr00159 family protein | SAMN05421827_11543 | Not Available | + | 4083088 - 4083879 | 29918.1 |
| putative bacilliredoxin, yphp/yqiw family | SAMN05421827_11544 | Not Available | - | 4084126 - 4084536 | 14890.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.