Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | SAMN05421827_11525 | Not Available | - | 4065425 - 4066273 | 32165.0 |
| putative membrane protein | SAMN05421827_11526 | Not Available | - | 4066286 - 4066960 | 25518.1 |
| chlorobactene glucosyltransferase | SAMN05421827_11527 | Not Available | - | 4066930 - 4068027 | 41539.9 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | SAMN05421827_11528 | Not Available | - | 4068024 - 4068647 | 24359.6 |
| rep element-mobilizing transposase rayt | SAMN05421827_11529 | Not Available | + | 4069013 - 4069558 | 21382.7 |
| pyrimidine operon attenuation protein / uracil phosphoribosyltransferase | SAMN05421827_11530 | Not Available | - | 4069859 - 4070365 | 19150.6 |
| putative auto-transporter adhesin, head gin domain | SAMN05421827_11531 | Not Available | + | 4070555 - 4071259 | 24670.1 |
| hypothetical protein | SAMN05421827_11532 | Not Available | - | 4071392 - 4071805 | 15661.7 |
| 23s rrna (uracil1939-c5)-methyltransferase | SAMN05421827_11533 | Not Available | - | 4071888 - 4073318 | 54002.6 |
| peptidase family m28 | SAMN05421827_11534 | Not Available | + | 4073754 - 4075463 | 63917.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.