Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421827_1155 | Not Available | - | 4045372 - 4046913 | 56134.6 |
| lema protein | SAMN05421827_1156 | Not Available | + | 4047474 - 4048055 | 21246.3 |
| tlp18.3, psb32 and molo-1 founding protein of phosphatase | SAMN05421827_1157 | Not Available | + | 4048138 - 4048581 | 16185.4 |
| uncharacterized protein | SAMN05421827_1158 | Not Available | + | 4048585 - 4049355 | 26593.7 |
| hypothetical protein | SAMN05421827_1159 | Not Available | + | 4049479 - 4049868 | 15093.2 |
| 8-oxo-dgtp pyrophosphatase mutt, nudix family | SAMN05421827_11510 | Not Available | + | 4049920 - 4050468 | 20831.9 |
| chromosomal replication initiator protein dnaa | SAMN05421827_11511 | Not Available | - | 4050579 - 4052009 | 53879.2 |
| methylmalonyl-coa mutase, n-terminal domain | SAMN05421827_11512 | Not Available | - | 4052554 - 4054101 | 57076.8 |
| hypothetical protein | SAMN05421827_11513 | Not Available | - | 4054240 - 4054770 | 20144.8 |
| iron-sulfur cluster assembly protein | SAMN05421827_11514 | Not Available | + | 4054863 - 4055216 | 12721.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.