Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-pro | Not Available | Not Available | + | 4019522 - 4019598 | Not Available |
| Trna-pro | Not Available | Not Available | + | 4019650 - 4019723 | Not Available |
| rna polymerase sigma factor, sigma-70 family | SAMN05421827_11489 | Not Available | + | 4019875 - 4020501 | 24633.8 |
| protein of unknown function | SAMN05421827_11490 | Not Available | + | 4020568 - 4021590 | 38296.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421827_11491 | Not Available | + | 4021678 - 4025091 | 123060.0 |
| starch-binding associating with outer membrane | SAMN05421827_11492 | Not Available | + | 4025102 - 4026634 | 56459.2 |
| alpha-l-fucosidase | SAMN05421827_11493 | Not Available | + | 4026697 - 4028331 | 61680.8 |
| hexosaminidase | SAMN05421827_11494 | Not Available | + | 4028353 - 4030650 | 86902.3 |
| gnt-i system high-affinity gluconate transporter | SAMN05421827_11495 | Not Available | + | 4030651 - 4031967 | 46393.1 |
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN05421827_11496 | Not Available | + | 4031987 - 4032457 | 17009.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.