Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dolichol-phosphate mannosyltransferase | SAMN05421827_11477 | Not Available | - | 4007877 - 4008653 | 29341.5 |
| proton-dependent oligopeptide transporter, pot family | SAMN05421827_11478 | Not Available | - | 4009151 - 4010632 | 55355.9 |
| proton-dependent oligopeptide transporter, pot family | SAMN05421827_11479 | Not Available | - | 4010697 - 4012292 | 58760.6 |
| hypothetical protein | SAMN05421827_11480 | Not Available | - | 4012428 - 4013324 | 33869.8 |
| acetyl-coa c-acetyltransferase | SAMN05421827_11481 | Not Available | - | 4013354 - 4014529 | 40827.9 |
| hypothetical protein | SAMN05421827_11482 | Not Available | - | 4015501 - 4015668 | 6280.61 |
| hypothetical protein | SAMN05421827_11483 | Not Available | - | 4015671 - 4016192 | 20360.2 |
| regulator of protease activity hflc, stomatin/prohibitin superfamily | SAMN05421827_11484 | Not Available | - | 4016197 - 4017054 | 31396.3 |
| hypothetical protein | SAMN05421827_11485 | Not Available | + | 4017173 - 4019251 | 79547.2 |
| Trna-ser | Not Available | Not Available | + | 4019334 - 4019423 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.