Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysm repeat-containing protein | SAMN05421827_11456 | Not Available | - | 3980397 - 3981920 | 55455.3 |
| starvation-inducible dna-binding protein | SAMN05421827_11457 | Not Available | + | 3982203 - 3982682 | 18504.2 |
| 4-hydroxy-3-polyprenylbenzoate decarboxylase | SAMN05421827_11458 | Not Available | + | 3982691 - 3984631 | 71591.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421827_11459 | Not Available | + | 3985239 - 3988247 | 109384.0 |
| starch-binding associating with outer membrane | SAMN05421827_11460 | Not Available | + | 3988272 - 3989669 | 51369.4 |
| histidine kinase | SAMN05421827_11461 | Not Available | + | 3989706 - 3990017 | 11949.5 |
| hypothetical protein | SAMN05421827_11462 | Not Available | + | 3990380 - 3992794 | 90037.5 |
| long-chain fatty acid transport protein | SAMN05421827_11463 | Not Available | - | 3992845 - 3994371 | 54863.1 |
| hypothetical protein | SAMN05421827_11464 | Not Available | - | 3994393 - 3995406 | 36388.0 |
| prolyl-trna synthetase | SAMN05421827_11465 | Not Available | + | 3995603 - 3997075 | 55887.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.