Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421827_11446 | Not Available | - | 3969917 - 3971104 | 43997.7 |
| aspartate kinase | SAMN05421827_11447 | Not Available | - | 3971209 - 3972516 | 49538.0 |
| l-amino acid n-acyltransferase ynca | SAMN05421827_11448 | Not Available | - | 3972479 - 3972946 | 17897.2 |
| hypothetical protein | SAMN05421827_11449 | Not Available | - | 3972948 - 3973649 | 26296.9 |
| protein of unknown function | SAMN05421827_11450 | Not Available | + | 3973743 - 3974276 | 19500.2 |
| dna mismatch repair protein muts2 | SAMN05421827_11451 | Not Available | + | 3974278 - 3976656 | 89813.9 |
| dehydrogenase, pqq-dependent, s-gdh family | SAMN05421827_11452 | Not Available | + | 3976810 - 3977898 | 39667.3 |
| 3-oxoacid coa-transferase subunit a | SAMN05421827_11453 | Not Available | + | 3978194 - 3978898 | 25596.8 |
| 3-oxoacid coa-transferase subunit b | SAMN05421827_11454 | Not Available | + | 3978976 - 3979635 | 23479.0 |
| uridine kinase | SAMN05421827_11455 | Not Available | - | 3979750 - 3980400 | 24874.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.