Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421827_11436 | Not Available | - | 3962964 - 3963119 | 6104.49 |
| fe-s cluster biogenesis protein nfua, 4fe-4s-binding domain | SAMN05421827_11437 | Not Available | - | 3963160 - 3963711 | 20082.7 |
| adenylosuccinate lyase | SAMN05421827_11438 | Not Available | - | 3963799 - 3965145 | 50495.0 |
| hypothetical protein | SAMN05421827_11439 | Not Available | - | 3965457 - 3965675 | 7523.81 |
| hypothetical protein | SAMN05421827_11440 | Not Available | - | 3965807 - 3966025 | 7609.91 |
| hypothetical protein | SAMN05421827_11441 | Not Available | - | 3966173 - 3966391 | 7594.94 |
| rna polymerase sigma factor, sigma-70 family | SAMN05421827_11442 | Not Available | + | 3966595 - 3967161 | 21788.0 |
| trypsin-like peptidase domain-containing protein | SAMN05421827_11443 | Not Available | + | 3967168 - 3968262 | 40347.0 |
| alkyl hydroperoxide reductase subunit ahpc (peroxiredoxin) | SAMN05421827_11444 | Not Available | + | 3968424 - 3969059 | 23463.6 |
| cold shock protein (beta-ribbon, cspa family) | SAMN05421827_11445 | Not Available | + | 3969261 - 3969458 | 7300.79 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.