Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05421827_11426 | Not Available | + | 3951327 - 3953837 | 93578.0 |
| chemotaxis protein motb | SAMN05421827_11427 | Not Available | + | 3953910 - 3954773 | 31777.8 |
| hypothetical protein | SAMN05421827_11428 | Not Available | + | 3955230 - 3955463 | 8899.52 |
| pas domain s-box-containing protein | SAMN05421827_11429 | Not Available | - | 3955494 - 3957347 | 70214.4 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05421827_11430 | Not Available | + | 3957612 - 3958241 | 24521.7 |
| hypothetical protein | SAMN05421827_11431 | Not Available | + | 3958353 - 3958445 | 3446.36 |
| 4-hydroxy-3-polyprenylbenzoate decarboxylase | SAMN05421827_11432 | Not Available | + | 3958694 - 3959263 | 20972.3 |
| threonylcarbamoyladenosine trna methylthiotransferase mtab | SAMN05421827_11433 | Not Available | + | 3959404 - 3960726 | 49649.6 |
| prolipoprotein diacylglyceryl transferase | SAMN05421827_11434 | Not Available | + | 3960983 - 3962134 | 42839.0 |
| myo-inositol-1(or 4)-monophosphatase | SAMN05421827_11435 | Not Available | + | 3962192 - 3962980 | 29669.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.