Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| selenoprotein w-related protein | SAMN05421827_1146 | Not Available | + | 3919809 - 3920090 | 10662.2 |
| two component regulator propeller | SAMN05421827_1147 | Not Available | + | 3920284 - 3924327 | 154177.0 |
| bnr repeat-containing family member | SAMN05421827_1148 | Not Available | + | 3924473 - 3925798 | 49502.5 |
| glycosyl hydrolases family 43 | SAMN05421827_1149 | Not Available | + | 3925810 - 3927978 | 81643.7 |
| rhamnogalacturonyl hydrolase yesr | SAMN05421827_11410 | Not Available | + | 3927978 - 3929111 | 44130.3 |
| hypothetical protein | SAMN05421827_11411 | Not Available | + | 3929125 - 3930372 | 47313.9 |
| glycosyl hydrolases family 43 | SAMN05421827_11412 | Not Available | + | 3930446 - 3931567 | 41648.6 |
| beta-galactosidase | SAMN05421827_11413 | Not Available | + | 3931598 - 3933511 | 71805.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421827_11414 | Not Available | + | 3933762 - 3936791 | 109712.0 |
| starch-binding associating with outer membrane | SAMN05421827_11415 | Not Available | + | 3936803 - 3938428 | 60066.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.