Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c peroxidase | SAMN05421827_113115 | Not Available | - | 3895263 - 3896402 | 42796.4 |
| hypothetical protein | SAMN05421827_113116 | Not Available | - | 3896406 - 3897962 | 59579.2 |
| protein of unknown function | SAMN05421827_113117 | Not Available | - | 3898015 - 3899337 | 47721.5 |
| tonb-dependent receptor plug domain | SAMN05421827_113118 | Not Available | - | 3899349 - 3902147 | 103508.0 |
| amidophosphoribosyltransferase | SAMN05421827_113119 | Not Available | + | 3902369 - 3904270 | 72498.8 |
| hypothetical protein | SAMN05421827_113120 | Not Available | - | 3904294 - 3904527 | 8501.15 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN05421827_113121 | Not Available | - | 3904776 - 3905402 | 23080.2 |
| mfs transporter, fhs family, l-fucose permease | SAMN05421827_113122 | Not Available | + | 3905546 - 3906982 | 51404.6 |
| dcmp deaminase | SAMN05421827_113123 | Not Available | + | 3907046 - 3907504 | 16406.6 |
| gmp synthase (glutamine-hydrolysing) | SAMN05421827_113124 | Not Available | + | 3908082 - 3909611 | 56400.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.