Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421827_11395 | Not Available | - | 3876998 - 3877735 | 27710.2 |
| oligoendopeptidase f | SAMN05421827_11396 | Not Available | - | 3877804 - 3879507 | 65928.0 |
| 4-hydroxybenzoate polyprenyltransferase | SAMN05421827_11397 | Not Available | - | 3879603 - 3880460 | 32121.0 |
| hypothetical protein | SAMN05421827_11398 | Not Available | + | 3880549 - 3880662 | 4270.4 |
| gtp-binding protein | SAMN05421827_11399 | Not Available | - | 3880691 - 3881314 | 23616.6 |
| demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase | SAMN05421827_113100 | Not Available | + | 3881479 - 3882210 | 27527.3 |
| outer membrane protein beta-barrel domain-containing protein | SAMN05421827_113101 | Not Available | + | 3882207 - 3883004 | 30466.2 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN05421827_113102 | Not Available | + | 3883094 - 3883852 | 27700.5 |
| hypothetical protein | SAMN05421827_113103 | Not Available | + | 3884046 - 3884492 | 16453.1 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05421827_113104 | Not Available | + | 3884677 - 3885441 | 29018.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.