Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peroxiredoxin q/bcp | SAMN05421827_11384 | Not Available | - | 3866724 - 3867188 | 17138.3 |
| peptidase family m23 | SAMN05421827_11385 | Not Available | - | 3867310 - 3869043 | 64123.3 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | SAMN05421827_11386 | Not Available | - | 3869047 - 3869658 | 23122.8 |
| por secretion system c-terminal sorting domain-containing protein | SAMN05421827_11387 | Not Available | - | 3869735 - 3870274 | 19619.3 |
| kup system potassium uptake protein | SAMN05421827_11388 | Not Available | + | 3870454 - 3872412 | 73673.5 |
| hypothetical protein | SAMN05421827_11389 | Not Available | + | 3872416 - 3872568 | 5443.14 |
| rep element-mobilizing transposase rayt | SAMN05421827_11390 | Not Available | - | 3872609 - 3873160 | 21138.2 |
| amino acid transporter | SAMN05421827_11391 | Not Available | - | 3873172 - 3875118 | 70733.5 |
| predicted arabinose efflux permease, mfs family | SAMN05421827_11392 | Not Available | + | 3875370 - 3876632 | 46983.6 |
| hypothetical protein | SAMN05421827_11393 | Not Available | - | 3876644 - 3876784 | 5197.24 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.