Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN05421827_11374 | Not Available | - | 3854415 - 3857327 | 105839.0 |
| 7tmr-dism extracellular 2 | SAMN05421827_11375 | Not Available | - | 3857618 - 3859522 | 74397.0 |
| signal transduction histidine kinase | SAMN05421827_11376 | Not Available | - | 3859586 - 3860890 | 50095.4 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN05421827_11377 | Not Available | - | 3860990 - 3861667 | 25995.3 |
| acetylornithine/succinyldiaminopimelate/ putresci ne aminotransferase | SAMN05421827_11378 | Not Available | - | 3861713 - 3862903 | 43495.0 |
| hypothetical protein | SAMN05421827_11379 | Not Available | - | 3862974 - 3863414 | 17228.0 |
| hypothetical protein | SAMN05421827_11380 | Not Available | - | 3863422 - 3864084 | 24810.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421827_11381 | Not Available | - | 3864118 - 3864726 | 23761.4 |
| transketolase | SAMN05421827_11382 | Not Available | - | 3864792 - 3865748 | 34463.6 |
| transketolase | SAMN05421827_11383 | Not Available | - | 3865824 - 3866669 | 30897.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.