Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc-2 type transport system permease protein | SAMN05421827_11364 | Not Available | - | 3842181 - 3843302 | 40816.9 |
| abc-2 type transport system atp-binding protein | SAMN05421827_11365 | Not Available | - | 3843380 - 3844144 | 28522.4 |
| hypothetical protein | SAMN05421827_11366 | Not Available | - | 3844241 - 3845101 | 33194.6 |
| carbamoyl-phosphate synthase small subunit | SAMN05421827_11367 | Not Available | - | 3845176 - 3846288 | 41009.9 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | SAMN05421827_11368 | Not Available | + | 3846608 - 3847423 | 29625.9 |
| 23s rrna pseudouridine1911/1915/1917 synthase | SAMN05421827_11369 | Not Available | + | 3847582 - 3848268 | 26093.6 |
| hypothetical protein | SAMN05421827_11370 | Not Available | - | 3848481 - 3848954 | 17124.4 |
| glucosylceramidase | SAMN05421827_11371 | Not Available | - | 3849061 - 3850509 | 52074.8 |
| beta-glucosidase | SAMN05421827_11372 | Not Available | - | 3850626 - 3852929 | 85083.6 |
| starch-binding associating with outer membrane | SAMN05421827_11373 | Not Available | - | 3852988 - 3854403 | 52171.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.