Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN05421827_11354 | Not Available | - | 3826452 - 3829466 | 107770.0 |
| y_y_y domain-containing protein | SAMN05421827_11355 | Not Available | - | 3829839 - 3832718 | 110475.0 |
| upf0176 protein | SAMN05421827_11356 | Not Available | - | 3833049 - 3833984 | 34968.8 |
| carboxypepd_reg-like domain-containing protein | SAMN05421827_11357 | Not Available | - | 3834122 - 3836569 | 93754.4 |
| 2-amino-3-ketobutyrate coenzyme a ligase | SAMN05421827_11358 | Not Available | + | 3836813 - 3838000 | 43405.4 |
| phenylalanyl-trna synthetase alpha chain | SAMN05421827_11359 | Not Available | + | 3838148 - 3839188 | 39505.2 |
| hypothetical protein | SAMN05421827_11360 | Not Available | + | 3839188 - 3839598 | 14672.8 |
| dna-binding transcriptional regulator, acrr family | SAMN05421827_11361 | Not Available | + | 3839600 - 3840175 | 22030.5 |
| hypothetical protein | SAMN05421827_11362 | Not Available | - | 3840368 - 3841051 | 25662.6 |
| fic family protein | SAMN05421827_11363 | Not Available | - | 3841107 - 3842063 | 36669.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.