Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| choline dehydrogenase | SAMN05421827_11342 | Not Available | - | 3811935 - 3813635 | 64169.1 |
| gluconate 2-dehydrogenase subunit 3 | SAMN05421827_11343 | Not Available | - | 3813654 - 3814241 | 21587.1 |
| nucleoside-diphosphate-sugar epimerase | SAMN05421827_11344 | Not Available | + | 3814734 - 3815678 | 35515.3 |
| dna-binding regulatory protein, yebc/pmpr family | SAMN05421827_11345 | Not Available | + | 3815753 - 3816481 | 27226.1 |
| phospholipase/carboxylesterase | SAMN05421827_11348 | Not Available | - | 3817683 - 3818462 | 29615.0 |
| beta-glucosidase | SAMN05421827_11349 | Not Available | - | 3818661 - 3820958 | 83261.1 |
| glycosyl hydrolases family 43 | SAMN05421827_11350 | Not Available | - | 3821291 - 3823045 | 66898.7 |
| hypothetical protein | SAMN05421827_11351 | Not Available | - | 3823060 - 3823470 | 14454.5 |
| hypothetical protein | SAMN05421827_11352 | Not Available | - | 3823529 - 3824902 | 51896.4 |
| starch-binding associating with outer membrane | SAMN05421827_11353 | Not Available | - | 3824959 - 3826440 | 54090.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.